Resultados da pesquisa - (( j fact (camp OR cam) ca net ) OR ((( _ nab compared a netw ) OR ( l nar compare a new ))))*

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1

Enhanced annotations and features for comparing thousands of Pseudomonas genomes in the Pseudomonas genome database

Enhanced annotations and features for comparing thousands of Pseudomonas genomes in the Pseudomonas genome database

Por Winsor, Geoffrey L., Griffiths, Emma J., Lo, Raymond, Dhillon, Bhavjinder K., Shay, Julie A., Brinkman, Fiona S. L.
Publicado no Nucleic Acids Res (2016)

“... approaches including a major new Pseudomonas community initiative for the assignment of high-quality gene...”
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2

TE-AFLP: combining rapidity and robustness in DNA fingerprinting

TE-AFLP: combining rapidity and robustness in DNA fingerprinting

Por van der Wurff, A. W. G., Chan, Y. L., van Straalen, N. M., Schouten, J.
Publicado em 2000

Assuntos: “...NAR Methods Online...”
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3

A method for quantification of absolute amounts of nucleic acids by (RT)–PCR and a new mathematical model for data analysis

A method for quantification of absolute amounts of nucleic acids by (RT)–PCR and a new mathematical model for data analysis

Por Vu, Huong L., Troubetzkoy, Serge, Nguyen, Huan H., Russell, Michael W., Mestecky, Jiri
Publicado em 2000

Assuntos: “...NAR Methods Online...”
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4

Comprehensive genome analysis of 203 genomes provides structural genomics with new insights into protein family space

Comprehensive genome analysis of 203 genomes provides structural genomics with new insights into protein family space

Por Marsden, Russell L., Lee, David, Maibaum, Michael, Yeats, Corin, Orengo, Christine A.
Publicado em 2006

“... and that singleton-sequences appear to be an intrinsic part of the genomes. A significant proportion of the proteomes...”
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5

Comparative interactomics with Funcoup 2.0

Comparative interactomics with Funcoup 2.0

Por Alexeyenko, Andrey, Schmitt, Thomas, Tjärnberg, Andreas, Guala, Dmitri, Frings, Oliver, Sonnhammer, Erik L. L.
Publicado em 2012

“... been updated and the methodology has been refined. It contains a new data type Genetic Interaction...”
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6

dictyBase: a new Dictyostelium discoideum genome database

dictyBase: a new Dictyostelium discoideum genome database

Por Kreppel, Lisa, Fey, Petra, Gaudet, Pascale, Just, Eric, Kibbe, Warren A., Chisholm, Rex L., Kimmel, Alan R.
Publicado em 2004

“... for Dictyostelium. Recent advances have focused on the development of a new comprehensive online resource called...”
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7

METAGENassist: a comprehensive web server for comparative metagenomics

METAGENassist: a comprehensive web server for comparative metagenomics

Por Arndt, David, Xia, Jianguo, Liu, Yifeng, Zhou, You, Guo, An Chi, Cruz, Joseph A., Sinelnikov, Igor, Budwill, Karen, Nesbø, Camilla L., Wishart, David S.
Publicado em 2012

“... data and bacterial census information has spawned a new branch of microbiology called comparative...”
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8

Genomes to natural products PRediction Informatics for Secondary Metabolomes (PRISM)

Genomes to natural products PRediction Informatics for Secondary Metabolomes (PRISM)

Por Skinnider, Michael A., Dejong, Chris A., Rees, Philip N., Johnston, Chad W., Li, Haoxin, Webster, Andrew L. H., Wyatt, Morgan A., Magarvey, Nathan A.
Publicado no Nucleic Acids Res (2015)

“.... New methods to connect biosynthetic gene clusters to novel chemical scaffolds are therefore critical...”
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9

A new method to remove hybridization bias for interspecies comparison of global gene expression profiles uncovers an association between mRNA sequence divergence and differential gene expression in Xenopus

A new method to remove hybridization bias for interspecies comparison of global gene expression...

Por Sartor, Maureen A., Zorn, Aaron M., Schwanekamp, Jennifer A., Halbleib, Danielle, Karyala, Saikumar, Howell, Michael L., Dean, Gary E., Medvedovic, Mario, Tomlinson, Craig R.
Publicado em 2006

“...The recent sequencing of a large number of Xenopus tropicalis expressed sequences has allowed...”
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10

Accurate, high-throughput typing of copy number variation using paralogue ratios from dispersed repeats

Accurate, high-throughput typing of copy number variation using paralogue ratios from dispersed repeats

Por Armour, John A. L., Palla, Raquel, Zeeuwen, Patrick L. J. M., den Heijer, Martin, Schalkwijk, Joost, Hollox, Edward J.
Publicado em 2007

“... comparative PCR method based on dispersed repeat sequences, using a single pair of precisely designed primers...”
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11

Mouse Genome Database (MGD)-2017: community knowledge resource for the laboratory mouse

Mouse Genome Database (MGD)-2017: community knowledge resource for the laboratory mouse

Por Blake, Judith A., Eppig, Janan T., Kadin, James A., Richardson, Joel E., Smith, Cynthia L., Bult, Carol J.
Publicado no Nucleic Acids Res (2017)

“... resource for the laboratory mouse. It provides a highly integrated and highly curated system offering a...”
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12

Accuracy and calibration of commercial oligonucleotide and custom cDNA microarrays

Accuracy and calibration of commercial oligonucleotide and custom cDNA microarrays

Por Yuen, Tony, Wurmbach, Elisa, Pfeffer, Robert L., Ebersole, Barbara J., Sealfon, Stuart C.
Publicado em 2002

Assuntos: “...NAR Methods Online...”
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13

CMCompare webserver: comparing RNA families via covariance models

CMCompare webserver: comparing RNA families via covariance models

Por Eggenhofer, Florian, Hofacker, Ivo L., Höner zu Siederdissen, Christian
Publicado em 2013

“... between models. The CMCws provides options to compare new models against all existing models...”
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14

InParanoid 7: new algorithms and tools for eukaryotic orthology analysis

InParanoid 7: new algorithms and tools for eukaryotic orthology analysis

Por Östlund, Gabriel, Schmitt, Thomas, Forslund, Kristoffer, Köstler, Tina, Messina, David N., Roopra, Sanjit, Frings, Oliver, Sonnhammer, Erik L. L.
Publicado em 2010

“...). Several features have been added, the response times have been improved and the site now sports a new...”
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15

FlyBase: genomes by the dozen

FlyBase: genomes by the dozen

Por Crosby, Madeline A., Goodman, Joshua L., Strelets, Victor B., Zhang, Peili, Gelbart, William M.
Publicado em 2007

“... phylogenetic relationships, provides a model system for comparative genomic analyses. FlyBase has developed...”
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16

dictyBase 2013: integrating multiple Dictyostelid species

dictyBase 2013: integrating multiple Dictyostelid species

Por Basu, Siddhartha, Fey, Petra, Pandit, Yogesh, Dodson, Robert, Kibbe, Warren A., Chisholm, Rex L.
Publicado em 2013

“...–1891)]. The new release includes a new Genome Browser with RNAseq expression, interspecies Basic Local...”
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17

Identification of protein-coding sequences using the hybridization of 18S rRNA and mRNA during translation

Identification of protein-coding sequences using the hybridization of 18S rRNA and mRNA during translation

Por Xing, Chuanhua, Bitzer, Donald L., Alexander, Winser E., Vouk, Mladen A., Stomp, Anne-Marie
Publicado em 2009

“...We introduce a new approach in this article to distinguish protein-coding sequences from non-coding...”
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18

WormQTL(HD)—a web database for linking human disease to natural variation data in C. elegans

WormQTL(HD)—a web database for linking human disease to natural variation data in C. elegans

Por van der Velde, K. Joeri, de Haan, Mark, Zych, Konrad, Arends, Danny, Snoek, L. Basten, Kammenga, Jan E., Jansen, Ritsert C., Swertz, Morris A., Li, Yang
Publicado em 2014

Assuntos: “...V. Human genome, model organisms, comparative genomics...”
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19

Current status and new features of the Consensus Coding Sequence database

Current status and new features of the Consensus Coding Sequence database

Por Farrell, Catherine M., O’Leary, Nuala A., Harte, Rachel A., Loveland, Jane E., Wilming, Laurens G., Wallin, Craig, Diekhans, Mark, Barrell, Daniel, Searle, Stephen M. J., Aken, Bronwen, Hiatt, Susan M., Frankish, Adam, Suner, Marie-Marthe, Rajput, Bhanu, Steward, Charles A., Brown, Garth R., Bennett, Ruth, Murphy, Michael, Wu, Wendy, Kay, Mike P., Hart, Jennifer, Rajan, Jeena, Weber, Janet, Snow, Catherine, Riddick, Lillian D., Hunt, Toby, Webb, David, Thomas, Mark, Tamez, Pamela, Rangwala, Sanjida H., McGarvey, Kelly M., Pujar, Shashikant, Shkeda, Andrei, Mudge, Jonathan M., Gonzalez, Jose M., Gilbert, James G. R., Trevanion, Stephen J., Baertsch, Robert, Harrow, Jennifer L., Hubbard, Tim, Ostell, James M., Haussler, David, Pruitt, Kim D.
Publicado em 2014

Assuntos: “...V. Human genome, model organisms, comparative genomics...”
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20

Identifying novel sequence variants of RNA 3D motifs

Identifying novel sequence variants of RNA 3D motifs

Por Zirbel, Craig L., Roll, James, Sweeney, Blake A., Petrov, Anton I., Pirrung, Meg, Leontis, Neocles B.
Publicado no Nucleic Acids Res (2015)

“...Predicting RNA 3D structure from sequence is a major challenge in biophysics. An important sub-goal...”
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