WebFR3D—a server for finding, aligning and analyzing recurrent RNA 3D motifs

Por Petrov, Anton I., Zirbel, Craig L., Leontis, Neocles B.
Publicado em 2011

Automated classification of RNA 3D motifs and the RNA 3D Motif Atlas

Por Petrov, Anton I., Zirbel, Craig L., Leontis, Neocles B.
Publicado em 2013

A Three-Dimensional RNA Motif in Potato spindle tuber viroid Mediates Trafficking from Palisade Mesophyll to Spongy Mesophyll in Nicotiana benthamiana([W])

Por Takeda, Ryuta, Petrov, Anton I., Leontis, Neocles B., Ding, Biao
Publicado em 2011

Quantum chemical studies of nucleic acids: Can we construct a bridge to the RNA structural biology and bioinformatics communities?

Por Šponer, Jiří, Šponer, Judit E., Petrov, Anton I., Leontis, Neocles B.
Publicado no J Phys Chem B (2010)

R3D Align web server for global nucleotide to nucleotide alignments of RNA 3D structures

Por Rahrig, Ryan R., Petrov, Anton I., Leontis, Neocles B., Zirbel, Craig L.
Publicado em 2013

JAR3D Webserver: Scoring and aligning RNA loop sequences to known 3D motifs

Por Roll, James, Zirbel, Craig L., Sweeney, Blake, Petrov, Anton I., Leontis, Neocles
Publicado no Nucleic Acids Res (2016)

Comprehensive survey and geometric classification of base triples in RNA structures

Por Abu Almakarem, Amal S., Petrov, Anton I., Stombaugh, Jesse, Zirbel, Craig L., Leontis, Neocles B.
Publicado em 2012

Identifying novel sequence variants of RNA 3D motifs

Por Zirbel, Craig L., Roll, James, Sweeney, Blake A., Petrov, Anton I., Pirrung, Meg, Leontis, Neocles B.
Publicado no Nucleic Acids Res (2015)

R3D-2-MSA: the RNA 3D structure-to-multiple sequence alignment server

Por Cannone, Jamie J., Sweeney, Blake A., Petrov, Anton I., Gutell, Robin R., Zirbel, Craig L., Leontis, Neocles
Publicado no Nucleic Acids Res (2015)

The Nucleic Acid Database: new features and capabilities

Por Coimbatore Narayanan, Buvaneswari, Westbrook, John, Ghosh, Saheli, Petrov, Anton I., Sweeney, Blake, Zirbel, Craig L., Leontis, Neocles B., Berman, Helen M.
Publicado em 2014