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Quantification, dynamic visualization, and validation of bias in ATAC-seq data with ataqv

The assay for transposase-accessible chromatin using sequencing (ATAC-seq) has become the preferred method for mapping chromatin accessibility, due to its time and input material efficiency. However, it can be difficult to evaluate data quality and identify sources of technical bias across samples....

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Bibliografske podrobnosti
izdano v:Cell Syst
Main Authors: Orchard, Peter, Kyono, Yasuhiro, Hensley, John, Kitzman, Jacob O., Parker, Stephen C.J.
Format: Artigo
Jezik:Inglês
Izdano: 2020
Teme:
Online dostop:https://ncbi.nlm.nih.gov/pmc/articles/PMC8245295/
https://ncbi.nlm.nih.gov/pubmed/32213349
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1016/j.cels.2020.02.009
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