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SPOTlight: seeded NMF regression to deconvolute spatial transcriptomics spots with single-cell transcriptomes

Spatially resolved gene expression profiles are key to understand tissue organization and function. However, spatial transcriptomics (ST) profiling techniques lack single-cell resolution and require a combination with single-cell RNA sequencing (scRNA-seq) information to deconvolute the spatially in...

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Detalhes bibliográficos
Publicado no:Nucleic Acids Res
Main Authors: Elosua-Bayes, Marc, Nieto, Paula, Mereu, Elisabetta, Gut, Ivo, Heyn, Holger
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2021
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC8136778/
https://ncbi.nlm.nih.gov/pubmed/33544846
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkab043
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