Loading...

CONCUR: quick and robust calculation of codon usage from ribosome profiling data

SUMMARY: CONCUR is a standalone tool for codon usage analysis in ribosome profiling experiments. CONCUR uses the aligned reads in BAM format to estimate codon counts at the ribosome E-, P- and A-sites and at flanking positions. AVAILABILITY AND IMPLEMENTATION: CONCUR is written in Perl and is freely...

Full description

Saved in:
Bibliographic Details
Published in:Bioinformatics
Main Authors: Frye, Michaela, Bornelöv, Susanne
Format: Artigo
Language:Inglês
Published: Oxford University Press 2020
Subjects:
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC8097682/
https://ncbi.nlm.nih.gov/pubmed/32866237
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btaa733
Tags: Add Tag
No Tags, Be the first to tag this record!