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Reduced metagenome sequencing for strain-resolution taxonomic profiles

BACKGROUND: Studies of shifts in microbial community composition has many applications. For studies at species or subspecies levels, the 16S amplicon sequencing lacks resolution and is often replaced by full shotgun sequencing. Due to higher costs, this restricts the number of samples sequenced. As...

Ausführliche Beschreibung

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Bibliographische Detailangaben
Veröffentlicht in:Microbiome
Hauptverfasser: Snipen, Lars, Angell, Inga-Leena, Rognes, Torbjørn, Rudi, Knut
Format: Artigo
Sprache:Inglês
Veröffentlicht: BioMed Central 2021
Schlagworte:
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC8008692/
https://ncbi.nlm.nih.gov/pubmed/33781324
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s40168-021-01019-8
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