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Measurement error and variant-calling in deep Illumina sequencing of HIV

MOTIVATION: Next-generation deep sequencing of viral genomes, particularly on the Illumina platform, is increasingly applied in HIV research. Yet, there is no standard protocol or method used by the research community to account for measurement errors that arise during sample preparation and sequenc...

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Vydáno v:Bioinformatics
Hlavní autoři: Howison, Mark, Coetzer, Mia, Kantor, Rami
Médium: Artigo
Jazyk:Inglês
Vydáno: Oxford University Press 2018
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC7963075/
https://ncbi.nlm.nih.gov/pubmed/30407489
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/bty919
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