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ViroMatch: A Computational Pipeline for the Detection of Viral Sequences from Complex Metagenomic Data

ViroMatch is an automated pipeline that takes metagenomic sequencing reads as input and performs iterative nucleotide and translated nucleotide mapping to identify viral sequences. We provide a Docker image for ViroMatch, so that users will not have to install dependencies.

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Podrobná bibliografie
Vydáno v:Microbiol Resour Announc
Hlavní autoři: Wylie, Todd N., Wylie, Kristine M.
Médium: Artigo
Jazyk:Inglês
Vydáno: American Society for Microbiology 2021
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC7936641/
https://ncbi.nlm.nih.gov/pubmed/33664143
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1128/MRA.01468-20
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