PathoFact: a pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data

BACKGROUND: Pathogenic microorganisms cause disease by invading, colonizing, and damaging their host. Virulence factors including bacterial toxins contribute to pathogenicity. Additionally, antimicrobial resistance genes allow pathogens to evade otherwise curative treatments. To understand causal re...

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Bibliografiske detaljer
Udgivet i:Microbiome
Main Authors: de Nies, Laura, Lopes, Sara, Busi, Susheel Bhanu, Galata, Valentina, Heintz-Buschart, Anna, Laczny, Cedric Christian, May, Patrick, Wilmes, Paul
Format: Artigo
Sprog:Inglês
Udgivet: BioMed Central 2021
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Software Article
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC7890817/
https://ncbi.nlm.nih.gov/pubmed/33597026
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s40168-020-00993-9
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