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PathoFact: a pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data

BACKGROUND: Pathogenic microorganisms cause disease by invading, colonizing, and damaging their host. Virulence factors including bacterial toxins contribute to pathogenicity. Additionally, antimicrobial resistance genes allow pathogens to evade otherwise curative treatments. To understand causal re...

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Detalhes bibliográficos
Publicado no:Microbiome
Main Authors: de Nies, Laura, Lopes, Sara, Busi, Susheel Bhanu, Galata, Valentina, Heintz-Buschart, Anna, Laczny, Cedric Christian, May, Patrick, Wilmes, Paul
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2021
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC7890817/
https://ncbi.nlm.nih.gov/pubmed/33597026
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s40168-020-00993-9
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