Concordance between predicted HLA type using next generation sequencing data generated for non-HLA purposes and clinical HLA type

We explored the feasibility of obtaining accurate HLA type using pre-existing NGS data not generated for HLA purposes. 83 exomes and 500 targeted NGS pharmacogenomic panels were analyzed using Omixon HLA Explore, OptiType, and/or HLA-Genotyper software. Results were compared against clinical HLA gen...

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Bibliografiske detaljer
Udgivet i:Hum Immunol
Main Authors: Moyer, Ann M., Dukek, Brian, Duellman, Patti, Schneider, Brittany, Wakefield, Laurie, Skierka, Jennifer M., Avula, Rajeswari, Bhagwate, Aditya V., Kalari, Krishna R., Kreuter, Justin D., Goetz, Matthew P., Boughey, Judy C., Black, John L., Gandhi, Manish J.
Format: Artigo
Sprog:Inglês
Udgivet: 2020
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Article
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC7721171/
https://ncbi.nlm.nih.gov/pubmed/32546429
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1016/j.humimm.2020.06.002
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