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K-mer counting and curated libraries drive efficient annotation of repeats in plant genomes

The annotation of repetitive sequences within plant genomes can help in the interpretation of observed phenotypes. Moreover, repeat masking is required for tasks such as whole-genome alignment, promoter analysis, or pangenome exploration. Although homology-based annotation methods are computationall...

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Библиографические подробности
Опубликовано в: :Plant Genome
Главные авторы: Contreras-Moreira, Bruno, Filippi, Carla V, Naamati, Guy, Girón, Carlos García, Allen, James E, Flicek, Paul
Формат: Artigo
Язык:Inglês
Опубликовано: 2021
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Online-ссылка:https://ncbi.nlm.nih.gov/pmc/articles/PMC7614178/
https://ncbi.nlm.nih.gov/pubmed/34562304
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1002/tpg2.20143
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