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K-mer counting and curated libraries drive efficient annotation of repeats in plant genomes

The annotation of repetitive sequences within plant genomes can help in the interpretation of observed phenotypes. Moreover, repeat masking is required for tasks such as whole-genome alignment, promoter analysis, or pangenome exploration. Although homology-based annotation methods are computationall...

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Bibliografiske detaljer
Udgivet i:Plant Genome
Main Authors: Contreras-Moreira, Bruno, Filippi, Carla V, Naamati, Guy, Girón, Carlos García, Allen, James E, Flicek, Paul
Format: Artigo
Sprog:Inglês
Udgivet: 2021
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC7614178/
https://ncbi.nlm.nih.gov/pubmed/34562304
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1002/tpg2.20143
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