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Peptide Gaussian accelerated molecular dynamics (Pep-GaMD): Enhanced sampling and free energy and kinetics calculations of peptide binding

Peptides mediate up to 40% of known protein–protein interactions in higher eukaryotes and play an important role in cellular signaling. However, it is challenging to simulate both binding and unbinding of peptides and calculate peptide binding free energies through conventional molecular dynamics, d...

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Detalhes bibliográficos
Publicado no:J Chem Phys
Main Authors: Wang, Jinan, Miao, Yinglong
Formato: Artigo
Idioma:Inglês
Publicado em: AIP Publishing LLC 2020
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC7575327/
https://ncbi.nlm.nih.gov/pubmed/33092378
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1063/5.0021399
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