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RepAHR: an improved approach for de novo repeat identification by assembly of the high-frequency reads

BACKGROUND: Repetitive sequences account for a large proportion of eukaryotes genomes. Identification of repetitive sequences plays a significant role in many applications, such as structural variation detection and genome assembly. Many existing de novo repeat identification pipelines or tools make...

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Vydáno v:BMC Bioinformatics
Hlavní autoři: Liao, Xingyu, Gao, Xin, Zhang, Xiankai, Wu, Fang-Xiang, Wang, Jianxin
Médium: Artigo
Jazyk:Inglês
Vydáno: BioMed Central 2020
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC7574428/
https://ncbi.nlm.nih.gov/pubmed/33076827
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-020-03779-w
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