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The Nubeam reference-free approach to analyze metagenomic sequencing reads

We present Nubeam (nucleotide be a matrix) as a novel reference-free approach to analyze short sequencing reads. Nubeam represents nucleotides by matrices, transforms a read into a product of matrices, and assigns numbers to reads based on the product matrix. Nubeam capitalizes on the noncommutative...

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Detalhes bibliográficos
Publicado no:Genome Res
Main Authors: Dai, Hang, Guan, Yongtao
Formato: Artigo
Idioma:Inglês
Publicado em: Cold Spring Harbor Laboratory Press 2020
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC7545149/
https://ncbi.nlm.nih.gov/pubmed/32883749
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1101/gr.261750.120
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