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ChIPseqSpikeInFree: a ChIP-seq normalization approach to reveal global changes in histone modifications without spike-in

MOTIVATION: The traditional reads per million normalization method is inappropriate for the evaluation of ChIP-seq data when treatments or mutations have global effects. Changes in global levels of histone modifications can be detected with exogenous reference spike-in controls. However, most ChIP-s...

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Bibliographische Detailangaben
Veröffentlicht in:Bioinformatics
Hauptverfasser: Jin, Hongjian, Kasper, Lawryn H, Larson, Jon D, Wu, Gang, Baker, Suzanne J, Zhang, Jinghui, Fan, Yiping
Format: Artigo
Sprache:Inglês
Veröffentlicht: Oxford University Press 2019
Schlagworte:
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC7523640/
https://ncbi.nlm.nih.gov/pubmed/31566663
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btz720
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