Detection of extended-spectrum beta-lactamase (ESBL) genes and plasmid replicons in Enterobacteriaceae using PlasmidSPAdes assembly of short-read sequence data

Knowledge of the epidemiology of plasmids is essential for understanding the evolution and spread of antimicrobial resistance. PlasmidSPAdes attempts to reconstruct plasmids using short-read sequence data. Accurate detection of extended-spectrum beta-lactamase (ESBL) genes and plasmid replicon genes...

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Détails bibliographiques
Publié dans:Microb Genom
Auteurs principaux: Stohr, Joep J.J.M., Kluytmans-van den Bergh, Marjolein F.Q., Wedema, Ronald, Friedrich, Alexander W., Kluytmans, Jan A.J.W., Rossen, John W.A.
Format: Artigo
Langue:Inglês
Publié: Microbiology Society 2020
Sujets:
Research Article
Accès en ligne:https://ncbi.nlm.nih.gov/pmc/articles/PMC7478632/
https://ncbi.nlm.nih.gov/pubmed/32589571
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1099/mgen.0.000400
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