Producing polished prokaryotic pangenomes with the Panaroo pipeline

Population-level comparisons of prokaryotic genomes must take into account the substantial differences in gene content resulting from horizontal gene transfer, gene duplication and gene loss. However, the automated annotation of prokaryotic genomes is imperfect, and errors due to fragmented assembli...

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Detalles Bibliográficos
Publicado en:Genome Biol
Main Authors: Tonkin-Hill, Gerry, MacAlasdair, Neil, Ruis, Christopher, Weimann, Aaron, Horesh, Gal, Lees, John A., Gladstone, Rebecca A., Lo, Stephanie, Beaudoin, Christopher, Floto, R. Andres, Frost, Simon D.W., Corander, Jukka, Bentley, Stephen D., Parkhill, Julian
Formato: Artigo
Idioma:Inglês
Publicado: BioMed Central 2020
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Software
Acceso en liña:https://ncbi.nlm.nih.gov/pmc/articles/PMC7376924/
https://ncbi.nlm.nih.gov/pubmed/32698896
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-020-02090-4
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