gplas: a comprehensive tool for plasmid analysis using short-read graphs

SUMMARY: Plasmids can horizontally transmit genetic traits, enabling rapid bacterial adaptation to new environments and hosts. Short-read whole-genome sequencing data are often applied to large-scale bacterial comparative genomics projects but the reconstruction of plasmids from these data is facing...

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Bibliografiske detaljer
Udgivet i:Bioinformatics
Main Authors: Arredondo-Alonso, Sergio, Bootsma, Martin, Hein, Yaïr, Rogers, Malbert R C, Corander, Jukka, Willems, Rob J L, Schürch, Anita C
Format: Artigo
Sprog:Inglês
Udgivet: Oxford University Press 2020
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Applications Notes
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC7320608/
https://ncbi.nlm.nih.gov/pubmed/32271863
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btaa233
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