Comparison of Bioinformatics Pipelines and Operating Systems for the Analyses of 16S rRNA Gene Amplicon Sequences in Human Fecal Samples

Amplicon high-throughput sequencing of 16S ribosomal RNA (rRNA) gene is currently the most widely used technique to investigate complex gut microbial communities. Microbial identification might be influenced by several factors, including the choice of bioinformatic pipelines, making comparisons acro...

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Detalhes bibliográficos
Publicado no:Front Microbiol
Main Authors: Marizzoni, Moira, Gurry, Thomas, Provasi, Stefania, Greub, Gilbert, Lopizzo, Nicola, Ribaldi, Federica, Festari, Cristina, Mazzelli, Monica, Mombelli, Elisa, Salvatore, Marco, Mirabelli, Peppino, Franzese, Monica, Soricelli, Andrea, Frisoni, Giovanni B., Cattaneo, Annamaria
Formato: Artigo
Idioma:Inglês
Publicado em: Frontiers Media S.A. 2020
Assuntos:
Microbiology
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC7318847/
https://ncbi.nlm.nih.gov/pubmed/32636817
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.3389/fmicb.2020.01262
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