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V-SVA: an R Shiny application for detecting and annotating hidden sources of variation in single-cell RNA-seq data

SUMMARY: Single-cell RNA-sequencing (scRNA-seq) technology enables studying gene expression programs from individual cells. However, these data are subject to diverse sources of variation, including ‘unwanted’ variation that needs to be removed in downstream analyses (e.g. batch effects) and ‘wanted...

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Detalhes bibliográficos
Publicado no:Bioinformatics
Main Authors: Lawlor, Nathan, Marquez, Eladio J, Lee, Donghyung, Ucar, Duygu
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2020
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC7267827/
https://ncbi.nlm.nih.gov/pubmed/32119082
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btaa128
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