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ATAC-seq identifies thousands of extrachromosomal circular DNA in cancer and cell lines

Extrachromosomal circular DNAs (eccDNAs) are somatically mosaic and contribute to intercellular heterogeneity in normal and tumor cells. Because short eccDNAs are poorly chromatinized, we hypothesized that they are sequenced by tagmentation in ATAC-seq experiments without any enrichment of circular...

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Bibliographische Detailangaben
Veröffentlicht in:Sci Adv
Hauptverfasser: Kumar, Pankaj, Kiran, Shashi, Saha, Shekhar, Su, Zhangli, Paulsen, Teressa, Chatrath, Ajay, Shibata, Yoshiyuki, Shibata, Etsuko, Dutta, Anindya
Format: Artigo
Sprache:Inglês
Veröffentlicht: American Association for the Advancement of Science 2020
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Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC7228742/
https://ncbi.nlm.nih.gov/pubmed/32440553
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1126/sciadv.aba2489
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