Identifying and removing haplotypic duplication in primary genome assemblies

MOTIVATION: Rapid development in long-read sequencing and scaffolding technologies is accelerating the production of reference-quality assemblies for large eukaryotic genomes. However, haplotype divergence in regions of high heterozygosity often results in assemblers creating two copies rather than...

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Shranjeno v:
Bibliografske podrobnosti
izdano v:Bioinformatics
Main Authors: Guan, Dengfeng, McCarthy, Shane A, Wood, Jonathan, Howe, Kerstin, Wang, Yadong, Durbin, Richard
Format: Artigo
Jezik:Inglês
Izdano: Oxford University Press 2020
Teme:
Applications Notes
Online dostop:https://ncbi.nlm.nih.gov/pmc/articles/PMC7203741/
https://ncbi.nlm.nih.gov/pubmed/31971576
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btaa025
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