CCMetagen: comprehensive and accurate identification of eukaryotes and prokaryotes in metagenomic data

There is an increasing demand for accurate and fast metagenome classifiers that can not only identify bacteria, but all members of a microbial community. We used a recently developed concept in read mapping to develop a highly accurate metagenomic classification pipeline named CCMetagen. The pipelin...

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Publicat a:Genome Biol
Autors principals: Marcelino, Vanessa R., Clausen, Philip T. L. C., Buchmann, Jan P., Wille, Michelle, Iredell, Jonathan R., Meyer, Wieland, Lund, Ole, Sorrell, Tania C., Holmes, Edward C.
Format: Artigo
Idioma:Inglês
Publicat: BioMed Central 2020
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Software
Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC7189439/
https://ncbi.nlm.nih.gov/pubmed/32345331
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-020-02014-2
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