CCMetagen: comprehensive and accurate identification of eukaryotes and prokaryotes in metagenomic data

There is an increasing demand for accurate and fast metagenome classifiers that can not only identify bacteria, but all members of a microbial community. We used a recently developed concept in read mapping to develop a highly accurate metagenomic classification pipeline named CCMetagen. The pipelin...

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Bibliografiske detaljer
Udgivet i:Genome Biol
Main Authors: Marcelino, Vanessa R., Clausen, Philip T. L. C., Buchmann, Jan P., Wille, Michelle, Iredell, Jonathan R., Meyer, Wieland, Lund, Ole, Sorrell, Tania C., Holmes, Edward C.
Format: Artigo
Sprog:Inglês
Udgivet: BioMed Central 2020
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Software
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC7189439/
https://ncbi.nlm.nih.gov/pubmed/32345331
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-020-02014-2
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