Matching Reads to Many Genomes with the r-Index

The r-index is a tool for compressed indexing of genomic databases for exact pattern matching, which can be used to completely align reads that perfectly match some part of a genome in the database or to find seeds for reads that do not. This article shows how to download and install the programs ri...

Full description

Saved in:
Bibliographic Details
Published in:J Comput Biol
Main Authors: Mun, Taher, Kuhnle, Alan, Boucher, Christina, Gagie, Travis, Langmead, Ben, Manzini, Giovanni
Format: Artigo
Language:Inglês
Published: Mary Ann Liebert, Inc., publishers 2020
Subjects:
Research Articles
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC7185317/
https://ncbi.nlm.nih.gov/pubmed/32181686
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1089/cmb.2019.0316
Tags: Add Tag
No Tags, Be the first to tag this record!

Similar Items