BAMscale: quantification of next-generation sequencing peaks and generation of scaled coverage tracks

BACKGROUND: Next-generation sequencing allows genome-wide analysis of changes in chromatin states and gene expression. Data analysis of these increasingly used methods either requires multiple analysis steps, or extensive computational time. We sought to develop a tool for rapid quantification of se...

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Dades bibliogràfiques
Publicat a:Epigenetics Chromatin
Autors principals: Pongor, Lorinc S., Gross, Jacob M., Vera Alvarez, Roberto, Murai, Junko, Jang, Sang-Min, Zhang, Hongliang, Redon, Christophe, Fu, Haiqing, Huang, Shar-Yin, Thakur, Bhushan, Baris, Adrian, Marino-Ramirez, Leonardo, Landsman, David, Aladjem, Mirit I., Pommier, Yves
Format: Artigo
Idioma:Inglês
Publicat: BioMed Central 2020
Matèries:
Methodology
Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC7175505/
https://ncbi.nlm.nih.gov/pubmed/32321568
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13072-020-00343-x
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