Systematic Evaluation of Whole Genome Sequence-Based Predictions of Salmonella Serotype and Antimicrobial Resistance

Whole-genome sequencing (WGS) is used increasingly in public-health laboratories for typing and characterizing foodborne pathogens. To evaluate the performance of existing bioinformatic tools for in silico prediction of antimicrobial resistance (AMR) and serotypes of Salmonella enterica, WGS-based g...

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Detalhes bibliográficos
Publicado no:Front Microbiol
Main Authors: Cooper, Ashley L., Low, Andrew J., Koziol, Adam G., Thomas, Matthew C., Leclair, Daniel, Tamber, Sandeep, Wong, Alex, Blais, Burton W., Carrillo, Catherine D.
Formato: Artigo
Idioma:Inglês
Publicado em: Frontiers Media S.A. 2020
Assuntos:
Microbiology
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC7147080/
https://ncbi.nlm.nih.gov/pubmed/32318038
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.3389/fmicb.2020.00549
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