Draft Whole-Genome Sequences of Escherichia fergusonii Strains Isolated from Beef Trim (GTA-EF02), Ground Beef (GTA-EF03), and Chopped Kale (GTA-EF04)

af Manninger, Paul, Koziol, Adam, Carrillo, Catherine D.
Udgivet i Genome Announc (2016)

Draft Genome Sequence of Hafnia paralvei Strain GTA-HAF03

af Kohlman, Melissa E., Carrillo, Catherine D., Wong, Alex
Udgivet i Genome Announc (2015)

Complete Genome Sequences of Citrobacter braakii Strains GTA-CB01 and GTA-CB04, Isolated from Ground Beef

af Basra, Prabh, Koziol, Adam, Wong, Alex, Carrillo, Catherine D.
Udgivet i Genome Announc (2015)

Draft Genome Sequences of Salmonella enterica subsp. enterica Serovar Berta ATCC 8392 and a Nalidixic Acid-Resistant Isolate of This Strain

af Cooper, Ashley, Koziol, Adam G., Carrillo, Catherine D., Lambert, Dominic
Udgivet i Genome Announc (2016)

Draft Genome Sequence of Bacillus megaterium Type Strain ATCC 14581

af Arya, Gitanjali, Petronella, Nicholas, Crosthwait, Jennifer, Carrillo, Catherine D., Shwed, Philip S.
Udgivet i Genome Announc (2014)

Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Mishmarhaemek Isolated from Bovine Feces

af Cooper, Ashley, Lambert, Dominic, Koziol, Adam G., Seyer, Karine, Carrillo, Catherine D.
Udgivet i Genome Announc (2015)

Multiplexed Single Intact Cell Droplet Digital PCR (MuSIC ddPCR) Method for Specific Detection of Enterohemorrhagic E. coli (EHEC) in Food Enrichment Cultures

af McMahon, Tanis C., Blais, Burton W., Wong, Alex, Carrillo, Catherine D.
Udgivet i Front Microbiol (2017)

GeneSippr: A Rapid Whole-Genome Approach for the Identification and Characterization of Foodborne Pathogens such as Priority Shiga Toxigenic Escherichia coli

af Lambert, Dominic, Carrillo, Catherine D., Koziol, Adam G., Manninger, Paul, Blais, Burton W.
Udgivet i PLoS One (2015)

A Framework for Assessing the Concordance of Molecular Typing Methods and the True Strain Phylogeny of Campylobacter jejuni and C. coli Using Draft Genome Sequence Data

af Carrillo, Catherine D., Kruczkiewicz, Peter, Mutschall, Steven, Tudor, Andrei, Clark, Clifford, Taboada, Eduardo N.
Udgivet 2012

ConFindr: rapid detection of intraspecies and cross-species contamination in bacterial whole-genome sequence data

af Low, Andrew J., Koziol, Adam G., Manninger, Paul A., Blais, Burton, Carrillo, Catherine D.
Udgivet i PeerJ (2019)

A comparison of fourteen fully characterized mammalian-associated Campylobacter fetus isolates suggests that loss of defense mechanisms contribute to high genomic plasticity and su...

af Nadin-Davis, Susan A., Chmara, John, Carrillo, Catherine D., Amoako, Kingsley, Goji, Noriko, Duceppe, Marc-Olivier, Devenish, John
Udgivet i PeerJ (2021)

“These Aren’t the Strains You’re Looking for”: Recovery Bias of Common Campylobacter jejuni Subtypes in Mixed Cultures

af Hetman, Benjamin M., Mutschall, Steven K., Carrillo, Catherine D., Thomas, James E., Gannon, Victor P. J., Inglis, G. Douglas, Taboada, Eduardo N.
Udgivet i Front Microbiol (2020)

Systematic Evaluation of Whole Genome Sequence-Based Predictions of Salmonella Serotype and Antimicrobial Resistance

af Cooper, Ashley L., Low, Andrew J., Koziol, Adam G., Thomas, Matthew C., Leclair, Daniel, Tamber, Sandeep, Wong, Alex, Blais, Burton W., Carrillo, Catherine D.
Udgivet i Front Microbiol (2020)

Modulation of Toxin Production by the Flagellar Regulon in Clostridium difficile

af Aubry, Annie, Hussack, Greg, Chen, Wangxue, KuoLee, Rhonda, Twine, Susan M., Fulton, Kelly M., Foote, Simon, Carrillo, Catherine D., Tanha, Jamshid, Logan, Susan M.
Udgivet 2012

A strain comparison of Campylobacter isolated from retail poultry and human clinical cases in Atlantic Canada

af Hodges, Lisa M., Carrillo, Catherine D., Upham, Jacqueline P., Borza, Antonela, Eisebraun, Mikaela, Kenwell, Robyn, Mutschall, Steven K., Haldane, David, Schleihauf, Emily, Taboada, Eduardo N.
Udgivet i PLoS One (2019)

Resistance Determinants and Their Genetic Context in Enterobacteria from a Longitudinal Study of Pigs Reared under Various Husbandry Conditions

af Poulin-Laprade, Dominic, Brouard, Jean-Simon, Gagnon, Nathalie, Turcotte, Annie, Langlois, Alexandra, Matte, J. Jacques, Carrillo, Catherine D., Zaheer, Rahat, McAllister, Tim A., Topp, Edward, Talbot, Guylaine
Udgivet i Appl Environ Microbiol (2021)

Large-Scale Comparative Genomics Meta-Analysis of Campylobacter jejuni Isolates Reveals Low Level of Genome Plasticity

af Taboada, Eduardo N., Acedillo, Rey R., Carrillo, Catherine D., Findlay, Wendy A., Medeiros, Diane T., Mykytczuk, Oksana L., Roberts, Michael J., Valencia, C. Alexander, Farber, Jeffrey M., Nash, John H. E.
Udgivet 2004

Comparative genomics profiling of clinical isolates of Aeromonas salmonicida using DNA microarrays

af Nash, John HE, Findlay, Wendy A, Luebbert, Christian C, Mykytczuk, Oksana L, Foote, Simon J, Taboada, Eduardo N, Carrillo, Catherine D, Boyd, Jessica M, Colquhoun, Duncan J, Reith, Michael E, Brown, Laura L
Udgivet 2006

Local genes for local bacteria: Evidence of allopatry in the genomes of transatlantic Campylobacter populations

af Pascoe, Ben, Méric, Guillaume, Yahara, Koji, Wimalarathna, Helen, Murray, Susan, Hitchings, Matthew D., Sproston, Emma L., Carrillo, Catherine D., Taboada, Eduardo N., Cooper, Kerry K., Huynh, Steven, Cody, Alison J., Jolley, Keith A., Maiden, Martin C. J., McCarthy, Noel D., Didelot, Xavier, Parker, Craig T., Sheppard, Samuel K.
Udgivet i Mol Ecol (2017)