Food Safety in the Age of Next Generation Sequencing, Bioinformatics, and Open Data Access

Autor Taboada, Eduardo N., Graham, Morag R., Carriço, João A., Van Domselaar, Gary
Vydáno v Front Microbiol (2017)

Subtype-Specific Selection for Resistance to Fluoroquinolones but Not to Tetracyclines Is Evident in Campylobacter jejuni Isolates from Beef Cattle in Confined Feeding Operations i...

Autor Webb, Andrew L., Selinger, L. Brent, Taboada, Eduardo N., Inglis, G. Douglas
Vydáno v Appl Environ Microbiol (2018)

A Framework for Assessing the Concordance of Molecular Typing Methods and the True Strain Phylogeny of Campylobacter jejuni and C. coli Using Draft Genome Sequence Data

Autor Carrillo, Catherine D., Kruczkiewicz, Peter, Mutschall, Steven, Tudor, Andrei, Clark, Clifford, Taboada, Eduardo N.
Vydáno 2012

Development of a comparative genomic fingerprinting assay for rapid and high resolution genotyping of Arcobacter butzleri

Autor Webb, Andrew L, Kruczkiewicz, Peter, Selinger, L Brent, Inglis, G Douglas, Taboada, Eduardo N
Vydáno v BMC Microbiol (2015)

A new approach for the analysis of bacterial microarray-based Comparative Genomic Hybridization: insights from an empirical study

Autor Taboada, Eduardo N, Acedillo, Rey R, Luebbert, Christian C, Findlay, Wendy A, Nash, John HE
Vydáno 2005

Tetracycline Resistant Campylobacter jejuni Subtypes Emanating from Beef Cattle Administered Non-Therapeutic Chlortetracycline are Longitudinally Transmitted within the Production...

Autor Inglis, G. Douglas, Gusse, Jenny F., House, Kathaleen E., Shelton, Tara G., Taboada, Eduardo N.
Vydáno v Microorganisms (2019)

Clinically Relevant Campylobacter jejuni Subtypes Are Readily Found and Transmitted within the Cattle Production Continuum but Present a Limited Foodborne Risk

Autor Inglis, G. Douglas, Gusse, Jenny F., House, Kathaleen E., Shelton, Tara G., Taboada, Eduardo N.
Vydáno v Appl Environ Microbiol (2020)

Erratum: Inglis, G.D., et al. Tetracycline Resistant Campylobacter jejuni Subtypes Emanating from Beef Cattle Administered Non-Therapeutic Chlortetracycline Are Longitudinally Tran...

Autor Inglis, G. Douglas, Gusse, Jenny F., House, Kathaleen E., Shelton, Tara G., Taboada, Eduardo N.
Vydáno v Microorganisms (2020)

Analysis of Campylobacter jejuni Subtype Distribution in the Chicken Broiler Production Continuum: a Longitudinal Examination To Identify Primary Contamination Points

Autor Inglis, G. Douglas, Ramezani, Nahal, Taboada, Eduardo N., Boras, Valerie F., Uwiera, Richard R. E.
Vydáno v Appl Environ Microbiol (2021)

Extensive characterization of Campylobacter jejuni chicken isolates to uncover genes involved in the ability to compete for gut colonization

Autor Thibodeau, Alexandre, Fravalo, Philippe, Taboada, Eduardo N., Laurent-Lewandowski, Sylvette, Guévremont, Evelyne, Quessy, Sylvain, Letellier, Ann
Vydáno v BMC Microbiol (2015)

Detection of Genetic Diversity in Campylobacter jejuni Isolated from a Commercial Turkey Flock Using flaA Typing, MLST Analysis and Microarray Assay

Autor El-Adawy, Hosny, Hotzel, Helmut, Tomaso, Herbert, Neubauer, Heinrich, Taboada, Eduardo N., Ehricht, Ralf, Hafez, Hafez M.
Vydáno 2013

Comparative Detection and Quantification of Arcobacter butzleri in Stools from Diarrheic and Nondiarrheic People in Southwestern Alberta, Canada

Autor Webb, Andrew L., Boras, Valerie F., Kruczkiewicz, Peter, Selinger, L. Brent, Taboada, Eduardo N., Inglis, G. Douglas
Vydáno v J Clin Microbiol (2016)

SuperPhy: predictive genomics for the bacterial pathogen Escherichia coli

Autor Whiteside, Matthew D., Laing, Chad R., Manji, Akiff, Kruczkiewicz, Peter, Taboada, Eduardo N., Gannon, Victor P. J.
Vydáno v BMC Microbiol (2016)

Comprehensive assessment of the quality of Salmonella whole genome sequence data available in public sequence databases using the Salmonella in silico Typing Resource (SISTR)

Autor Robertson, James, Yoshida, Catherine, Kruczkiewicz, Peter, Nadon, Celine, Nichani, Anil, Taboada, Eduardo N., Nash, John Howard Eagles
Vydáno v Microb Genom (2018)

Comparative genomic assessment of Multi-Locus Sequence Typing: rapid accumulation of genomic heterogeneity among clonal isolates of Campylobacter jejuni

Autor Taboada, Eduardo N, MacKinnon, Joanne M, Luebbert, Christian C, Gannon, Victor PJ, Nash, John HE, Rahn, Kris
Vydáno 2008

Source attribution of human campylobacteriosis at the point of exposure by combining comparative exposure assessment and subtype comparison based on comparative genomic fingerprint...

Autor Ravel, André, Hurst, Matt, Petrica, Nicoleta, David, Julie, Mutschall, Steven K., Pintar, Katarina, Taboada, Eduardo N., Pollari, Frank
Vydáno v PLoS One (2017)

Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions

Autor Villegas Andre, Kropinski Andrew, Zhang Yongxiang, Taboada Eduardo N, Buchanan Cody, Laing Chad, Thomas James E, Gannon Victor PJ
Vydáno 2010-09-01

In silico genomic analyses reveal three distinct lineages of Escherichia coli O157:H7, one of which is associated with hyper-virulence

Autor Laing, Chad R, Buchanan, Cody, Taboada, Eduardo N, Zhang, Yongxiang, Karmali, Mohamed A, Thomas, James E, Gannon, Victor PJ
Vydáno 2009

Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions

Autor Laing, Chad, Buchanan, Cody, Taboada, Eduardo N, Zhang, Yongxiang, Kropinski, Andrew, Villegas, Andre, Thomas, James E, Gannon, Victor PJ
Vydáno 2010

Genome-wide identification of geographical segregated genetic markers in Salmonella enterica serovar Typhimurium variant 4,[5],12:i:-

Autor Palma, Federica, Manfreda, Gerardo, Silva, Mickael, Parisi, Antonio, Barker, Dillon O. R., Taboada, Eduardo N., Pasquali, Frédérique, Rossi, Mirko
Vydáno v Sci Rep (2018)