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Structural Alignment of Pseudoknotted RNA

In this paper, we address the problem of discovering novel non-coding RNA (ncRNA) using primary sequence, and secondary structure conservation, focusing on ncRNA families with pseudo-knotted structures. Our main technical result is an efficient algorithm for computing an optimum structural alignment...

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Détails bibliographiques
Publié dans:Research in Computational Molecular Biology
Auteurs principaux: Dost, Banu, Han, Buhm, Zhang, Shaojie, Bafna, Vineet
Format: Artigo
Langue:Inglês
Publié: 2006
Sujets:
Accès en ligne:https://ncbi.nlm.nih.gov/pmc/articles/PMC7121381/
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1007/11732990_13
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