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HIPPIE2: a method for fine-scale identification of physically interacting chromatin regions

Most regulatory chromatin interactions are mediated by various transcription factors (TFs) and involve physically interacting elements such as enhancers, insulators or promoters. To map these elements and interactions at a fine scale, we developed HIPPIE2 that analyzes raw reads from high-throughput...

Ausführliche Beschreibung

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Bibliographische Detailangaben
Veröffentlicht in:NAR Genom Bioinform
Hauptverfasser: Kuksa, Pavel P, Amlie-Wolf, Alexandre, Hwang, Yih-Chii, Valladares, Otto, Gregory, Brian D, Wang, Li-San
Format: Artigo
Sprache:Inglês
Veröffentlicht: Oxford University Press 2020
Schlagworte:
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC7106622/
https://ncbi.nlm.nih.gov/pubmed/32270138
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nargab/lqaa022
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