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A Poisson model of sequence comparison and its application to coronavirus phylogeny

In this paper, we propose two metrics to compare DNA and protein sequences based on a Poisson model of word occurrences. Instead of comparing the frequencies of all fixed-length words in two sequences, we consider (1) the probability of ‘generating’ one sequence under the Poisson model estimated fro...

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Dades bibliogràfiques
Publicat a:Math Biosci
Autors principals: Zheng, Xiaoqi, Qin, Yufang, Wang, Jun
Format: Artigo
Idioma:Inglês
Publicat: Elsevier Inc. 2009
Matèries:
Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC7094598/
https://ncbi.nlm.nih.gov/pubmed/19073197
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1016/j.mbs.2008.11.006
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