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A framework for assessing 16S rRNA marker-gene survey data analysis methods using mixtures.

BACKGROUND: There are a variety of bioinformatic pipelines and downstream analysis methods for analyzing 16S rRNA marker-gene surveys. However, appropriate assessment datasets and metrics are needed as there is limited guidance to decide between available analysis methods. Mixtures of environmental...

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Vydáno v:Microbiome
Hlavní autoři: Olson, Nathan D., Kumar, M. Senthil, Li, Shan, Braccia, Domenick J., Hao, Stephanie, Timp, Winston, Salit, Marc L., Stine, O. Colin, Bravo, Hector Corrada
Médium: Artigo
Jazyk:Inglês
Vydáno: BioMed Central 2020
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC7071580/
https://ncbi.nlm.nih.gov/pubmed/32169095
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s40168-020-00812-1
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