Cost effective, experimentally robust differential-expression analysis for human/mammalian, pathogen and dual-species transcriptomics

As sequencing read length has increased, researchers have quickly adopted longer reads for their experiments. Here, we examine 14 pathogen or host–pathogen differential gene expression data sets to assess whether using longer reads is warranted. A variety of data sets was used to assess what genomic...

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Vydáno v:Microb Genom
Hlavní autoři: Shetty, Amol C., Mattick, John, Chung, Matthew, McCracken, Carrie, Mahurkar, Anup, Filler, Scott G., Fraser, Claire M., Rasko, David A., Bruno, Vincent M., Dunning Hotopp, Julie C.
Médium: Artigo
Jazyk:Inglês
Vydáno: Microbiology Society 2019
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Research Article
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC7067034/
https://ncbi.nlm.nih.gov/pubmed/31851607
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1099/mgen.0.000320
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