Performance comparison of next generation sequencing analysis pipelines for HIV-1 drug resistance testing

Next generation sequencing (NGS) is a trending new standard for genotypic HIV-1 drug resistance (HIVDR) testing. Many NGS HIVDR data analysis pipelines have been independently developed, each with variable outputs and data management protocols. Standardization of such analytical methods and comparis...

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Pubblicato in:Sci Rep
Autori principali: Lee, Emma R., Parkin, Neil, Jennings, Cheryl, Brumme, Chanson J., Enns, Eric, Casadellà, Maria, Howison, Mark, Coetzer, Mia, Avila-Rios, Santiago, Capina, Rupert, Marinier, Eric, Van Domselaar, Gary, Noguera-Julian, Marc, Kirkby, Don, Knaggs, Jeff, Harrigan, Richard, Quiñones-Mateu, Miguel, Paredes, Roger, Kantor, Rami, Sandstrom, Paul, Ji, Hezhao
Natura: Artigo
Lingua:Inglês
Pubblicazione: Nature Publishing Group UK 2020
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Article
Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC6994664/
https://ncbi.nlm.nih.gov/pubmed/32005884
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/s41598-020-58544-z
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