Piphillin predicts metagenomic composition and dynamics from DADA2-corrected 16S rDNA sequences

BACKGROUND: Shotgun metagenomic sequencing reveals the potential in microbial communities. However, lower-cost 16S ribosomal RNA (rRNA) gene sequencing provides taxonomic, not functional, observations. To remedy this, we previously introduced Piphillin, a software package that predicts functional me...

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Detalhes bibliográficos
Publicado no:BMC Genomics
Main Authors: Narayan, Nicole R., Weinmaier, Thomas, Laserna-Mendieta, Emilio J., Claesson, Marcus J., Shanahan, Fergus, Dabbagh, Karim, Iwai, Shoko, DeSantis, Todd Z.
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2020
Assuntos:
Research Article
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC6967091/
https://ncbi.nlm.nih.gov/pubmed/31952477
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12864-019-6427-1
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