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Accurate quantification of circular RNAs identifies extensive circular isoform switching events

Detection and quantification of circular RNAs (circRNAs) face several significant challenges, including high false discovery rate, uneven rRNA depletion and RNase R treatment efficiency, and underestimation of back-spliced junction reads. Here, we propose a novel algorithm, CIRIquant, for accurate c...

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Vydáno v:Nat Commun
Hlavní autoři: Zhang, Jinyang, Chen, Shuai, Yang, Jingwen, Zhao, Fangqing
Médium: Artigo
Jazyk:Inglês
Vydáno: Nature Publishing Group UK 2020
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC6941955/
https://ncbi.nlm.nih.gov/pubmed/31900416
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/s41467-019-13840-9
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