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Dashing: fast and accurate genomic distances with HyperLogLog

Dashing is a fast and accurate software tool for estimating similarities of genomes or sequencing datasets. It uses the HyperLogLog sketch together with cardinality estimation methods that are specialized for set unions and intersections. Dashing summarizes genomes more rapidly than previous MinHash...

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Shranjeno v:
Bibliografske podrobnosti
izdano v:Genome Biol
Main Authors: Baker, Daniel N., Langmead, Ben
Format: Artigo
Jezik:Inglês
Izdano: BioMed Central 2019
Teme:
Online dostop:https://ncbi.nlm.nih.gov/pmc/articles/PMC6892282/
https://ncbi.nlm.nih.gov/pubmed/31801633
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13059-019-1875-0
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