SeqSero2: Rapid and Improved Salmonella Serotype Determination Using Whole-Genome Sequencing Data

SeqSero, launched in 2015, is a software tool for Salmonella serotype determination from whole-genome sequencing (WGS) data. Despite its routine use in public health and food safety laboratories in the United States and other countries, the original SeqSero pipeline is relatively slow (minutes per g...

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Vydáno v:Appl Environ Microbiol
Hlavní autoři: Zhang, Shaokang, den Bakker, Hendrik C., Li, Shaoting, Chen, Jessica, Dinsmore, Blake A., Lane, Charlotte, Lauer, A. C., Fields, Patricia I., Deng, Xiangyu
Médium: Artigo
Jazyk:Inglês
Vydáno: American Society for Microbiology 2019
Témata:
Food Microbiology
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC6856333/
https://ncbi.nlm.nih.gov/pubmed/31540993
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1128/AEM.01746-19
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