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SeqSero2: Rapid and Improved Salmonella Serotype Determination Using Whole-Genome Sequencing Data

SeqSero, launched in 2015, is a software tool for Salmonella serotype determination from whole-genome sequencing (WGS) data. Despite its routine use in public health and food safety laboratories in the United States and other countries, the original SeqSero pipeline is relatively slow (minutes per g...

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Bibliografiske detaljer
Udgivet i:Appl Environ Microbiol
Main Authors: Zhang, Shaokang, den Bakker, Hendrik C., Li, Shaoting, Chen, Jessica, Dinsmore, Blake A., Lane, Charlotte, Lauer, A. C., Fields, Patricia I., Deng, Xiangyu
Format: Artigo
Sprog:Inglês
Udgivet: American Society for Microbiology 2019
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC6856333/
https://ncbi.nlm.nih.gov/pubmed/31540993
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1128/AEM.01746-19
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