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Replica exchange Gaussian accelerated molecular dynamics: Improved enhanced sampling and free energy calculation

Through adding a harmonic boost potential to smooth the system potential energy surface, Gaussian accelerated molecular dynamics (GaMD) provides enhanced sampling and free energy calculation of biomolecules without the need of predefined reaction coordinates. This work continues to improve the accel...

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Detalles Bibliográficos
Publicado en:J Chem Theory Comput
Autores principales: Huang, Yu-ming M., McCammon, J. Andrew, Miao, Yinglong
Formato: Artigo
Lenguaje:Inglês
Publicado: 2018
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Acceso en línea:https://ncbi.nlm.nih.gov/pmc/articles/PMC6747702/
https://ncbi.nlm.nih.gov/pubmed/29489349
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1021/acs.jctc.7b01226
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