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Locality-sensitive hashing for the edit distance

MOTIVATION: Sequence alignment is a central operation in bioinformatics pipeline and, despite many improvements, remains a computationally challenging problem. Locality-sensitive hashing (LSH) is one method used to estimate the likelihood of two sequences to have a proper alignment. Using an LSH, it...

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Dettagli Bibliografici
Pubblicato in:Bioinformatics
Autori principali: Marçais, Guillaume, DeBlasio, Dan, Pandey, Prashant, Kingsford, Carl
Natura: Artigo
Lingua:Inglês
Pubblicazione: Oxford University Press 2019
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Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC6612865/
https://ncbi.nlm.nih.gov/pubmed/31510667
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btz354
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