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Building large updatable colored de Bruijn graphs via merging

MOTIVATION: There exist several large genomic and metagenomic data collection efforts, including GenomeTrakr and MetaSub, which are routinely updated with new data. To analyze such datasets, memory-efficient methods to construct and store the colored de Bruijn graph were developed. Yet, a problem th...

詳細記述

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書誌詳細
出版年:Bioinformatics
主要な著者: Muggli, Martin D, Alipanahi, Bahar, Boucher, Christina
フォーマット: Artigo
言語:Inglês
出版事項: Oxford University Press 2019
主題:
オンライン・アクセス:https://ncbi.nlm.nih.gov/pmc/articles/PMC6612864/
https://ncbi.nlm.nih.gov/pubmed/31510647
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btz350
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