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Plasmid detection and assembly in genomic and metagenomic data sets

Although plasmids are important for bacterial survival and adaptation, plasmid detection and assembly from genomic, let alone metagenomic, samples remain challenging. The recently developed plasmidSPAdes assembler addressed some of these challenges in the case of isolate genomes but stopped short of...

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Dettagli Bibliografici
Pubblicato in:Genome Res
Autori principali: Antipov, Dmitry, Raiko, Mikhail, Lapidus, Alla, Pevzner, Pavel A.
Natura: Artigo
Lingua:Inglês
Pubblicazione: Cold Spring Harbor Laboratory Press 2019
Soggetti:
Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC6581055/
https://ncbi.nlm.nih.gov/pubmed/31048319
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1101/gr.241299.118
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