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TAR-VIR: a pipeline for TARgeted VIRal strain reconstruction from metagenomic data

BACKGROUND: Strain-level RNA virus characterization is essential for developing prevention and treatment strategies. Viral metagenomic data, which can contain sequences of both known and novel viruses, provide new opportunities for characterizing RNA viruses. Although there are a number of pipelines...

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Vydáno v:BMC Bioinformatics
Hlavní autoři: Chen, Jiao, Huang, Jiating, Sun, Yanni
Médium: Artigo
Jazyk:Inglês
Vydáno: BioMed Central 2019
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC6549370/
https://ncbi.nlm.nih.gov/pubmed/31164077
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-019-2878-2
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