An integrated strain-level analytic pipeline utilizing longitudinal metagenomic data

ABSTRACT With the development of sequencing technology and analytic tools, studying within-species variations enhances the understanding of microbial biological processes. Nevertheless, most existing methods designed for strain-level analysis lack the capability to concurrently assess both strain pr...

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Principais autores:	Boyan Zhou, Chan Wang, Gregory Putzel, Jiyuan Hu, Menghan Liu, Fen Wu, Yu Chen, Alejandro Pironti, Huilin Li
Format:	Artigo
Jezik:	Inglês
Izdano:	American Society for Microbiology 2024-11-01
Serija:	Microbiology Spectrum
Teme:	microbiome longitudinal metagenomic data strain-level analysis genomic variants strain dynamics
Online dostop:	https://journals.asm.org/doi/10.1128/spectrum.01431-24
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