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Single-cell RNA-seq denoising using a deep count autoencoder

Single-cell RNA sequencing (scRNA-seq) has enabled researchers to study gene expression at a cellular resolution. However, noise due to amplification and dropout may obstruct analyses, so scalable denoising methods for increasingly large but sparse scRNA-seq data are needed. We propose a deep count...

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Foilsithe in:Nat Commun
Main Authors: Eraslan, Gökcen, Simon, Lukas M., Mircea, Maria, Mueller, Nikola S., Theis, Fabian J.
Formáid: Artigo
Teanga:Inglês
Foilsithe: Nature Publishing Group UK 2019
Ábhair:
Rochtain Ar Líne:https://ncbi.nlm.nih.gov/pmc/articles/PMC6344535/
https://ncbi.nlm.nih.gov/pubmed/30674886
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/s41467-018-07931-2
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