Assessment of metagenomic Nanopore and Illumina sequencing for recovering whole genome sequences of chikungunya and dengue viruses directly from clinical samples

BACKGROUND: The recent global emergence and re-emergence of arboviruses has caused significant human disease. Common vectors, symptoms and geographical distribution make differential diagnosis both important and challenging. AIM: To investigate the feasibility of metagenomic sequencing for recoverin...

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Bibliografiske detaljer
Udgivet i:Euro Surveill
Main Authors: Kafetzopoulou, Liana E., Efthymiadis, Kyriakos, Lewandowski, Kuiama, Crook, Ant, Carter, Dan, Osborne, Jane, Aarons, Emma, Hewson, Roger, Hiscox, Julian A., Carroll, Miles W., Vipond, Richard, Pullan, Steven T.
Format: Artigo
Sprog:Inglês
Udgivet: European Centre for Disease Prevention and Control (ECDC) 2018
Fag:
Research Article
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC6299504/
https://ncbi.nlm.nih.gov/pubmed/30563591
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.2807/1560-7917.ES.2018.23.50.1800228
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